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siVirus: web-based antiviral siRNA design software for highly divergent viral sequences

Identifieur interne : 004107 ( Main/Exploration ); précédent : 004106; suivant : 004108

siVirus: web-based antiviral siRNA design software for highly divergent viral sequences

Auteurs : Yuki Naito [Japon] ; Kumiko Ui-Tei [Japon] ; Toru Nishikawa [Japon] ; Yutaka Takebe [Japon] ; Kaoru Saigo [Japon]

Source :

RBID : ISTEX:0191DEE6E0B31171F5A8593BE29AE12B41EF6B99

Descripteurs français

English descriptors

Abstract

siVirus (http://siVirus.RNAi.jp/) is a web-based online software system that provides efficient short interfering RNA (siRNA) design for antiviral RNA interference (RNAi). siVirus searches for functional, off-target minimized siRNAs targeting highly conserved regions of divergent viral sequences. These siRNAs are expected to resist viral mutational escape, since their highly conserved targets likely contain structurally/functionally constrained elements. siVirus will be a useful tool for designing optimal siRNAs targeting highly divergent pathogens, including human immunodeficiency virus (HIV), hepatitis C virus (HCV), influenza virus and SARS coronavirus, all of which pose enormous threats to global human health.

Url:
DOI: 10.1093/nar/gkl214


Affiliations:


Links toward previous steps (curation, corpus...)


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<div type="abstract" xml:lang="en">siVirus (http://siVirus.RNAi.jp/) is a web-based online software system that provides efficient short interfering RNA (siRNA) design for antiviral RNA interference (RNAi). siVirus searches for functional, off-target minimized siRNAs targeting highly conserved regions of divergent viral sequences. These siRNAs are expected to resist viral mutational escape, since their highly conserved targets likely contain structurally/functionally constrained elements. siVirus will be a useful tool for designing optimal siRNAs targeting highly divergent pathogens, including human immunodeficiency virus (HIV), hepatitis C virus (HCV), influenza virus and SARS coronavirus, all of which pose enormous threats to global human health.</div>
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